{"id":498,"date":"2016-11-03T21:10:48","date_gmt":"2016-11-04T01:10:48","guid":{"rendered":"http:\/\/datapunk.net\/opus23blog\/?p=498"},"modified":"2021-05-12T09:06:28","modified_gmt":"2021-05-12T13:06:28","slug":"utopia-pansophia-sequential-outcome-analysis","status":"publish","type":"post","link":"https:\/\/datapunk.net\/opus23blog\/2016\/11\/03\/utopia-pansophia-sequential-outcome-analysis\/","title":{"rendered":"Utopia: Pansophia, sequential outcome analysis"},"content":{"rendered":"

PANSOPHIA \u2013 sequential outcome analysis<\/b><\/span><\/h2>\n

The genomic DNA analysis software Opus 23<\/a> includes the Utopia suite of apps for analyzing sequential uBiome<\/a> data, comparing sequencing-based clinical microbiome data with the client’s own genomic DNA.<\/p>\n

\"Utopia<\/p>\n

PANSOPHIA is an Utopia app that gives you the power to sort your client\u2019s data based upon associations with health and disease as well as several other useful categories including keystone, probiotic, core species and butyrate production.  <\/span>For those clients who have more than one data sample, PANSOPHIA allows you to visualize treatment progress in a graphical format that can be easily added to your client\u2019s report.<\/span><\/p>\n

Navigating PANSOPHIA<\/h3>\n

\"pansophia\" <\/span><\/p>\n

From the Utopia drop down menu, hover over \u2018analytics\u2019 until a second list appears, then select PANSOPHIA. You will then be presented with the default table which shows \u2018everything\u2019 and is sorted by \u2018rank\u2019 or \u2018percent\u2019.<\/p>\n

At the bottom of the window is a jump screen that allows you to move from one screen to the next. You can control how many rows to display be selecting an option from the \u2018Show\u2019 pull down menu. The default is 15.<\/span><\/p>\n

\"Pansophia<\/p>\n

Filtering and sorting results<\/b><\/span><\/h3>\n

PANSOPHIA allows you to parse the taxon data based upon desired treatment goals. Taxa are sortable by benefit as well as pathogenic potential.  <\/span>There are two ways to filter the data. <\/span><\/p>\n

Using category tabs:<\/b> <\/span><\/h4>\n

You can use the category tabs at the top of app\u2019s main screen to select taxa grouped by their associations with health and disease. Once a category is selected, the information will be displayed in graph form.<\/span><\/p>\n

\"Pansophia <\/span><\/p>\n

The PANSOPHIA graph uses the following symbols: <\/span><\/p>\n